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Publications 2021

Découvrez le CIRI à travers une sélection de ses publications de l'année 2021

Sélection de publications CIRI 2021, classées par ordre alphabétique du premier auteur: 


(1)          Ader, F.; Bouscambert-Duchamp, M.; Hites, M.; Peiffer-Smadja, N.; Poissy, J.; Belhadi, D.; Diallo, A.; Lê, M.-P.; Peytavin, G.; Staub, T.; Greil, R.; Guedj, J.; Paiva, J.-A.; Costagliola, D.; Yazdanpanah, Y.; Burdet, C.; Mentré, F.; DisCoVeRy Study Group. Remdesivir plus Standard of Care versus Standard of Care Alone for the Treatment of Patients Admitted to Hospital with COVID-19 (DisCoVeRy): A Phase 3, Randomised, Controlled, Open-Label Trial. Lancet Infect. Dis. 2021, S1473-3099(21)00485-0.
Equipe LegioPath

(2)          Allam, C.; Gaymard, A.; Descours, G.; Ginevra, C.; Josset, L.; Bouscambert, M.; Beraud, L.; Ibranosyan, M.; Golfier, C.; Friggeri, A.; Lina, B.; Campèse, C.; Ader, F.; Jarraud, S.; COVID-19 diagnosis HCL consortium1. Co-Infection with Legionella and SARS-CoV-2, France, March 2020. Emerg. Infect. Dis. 2021, 27 (11), 2864–2868.
Equipe LegioPath

(3)          Allombert, J.; Jaboulay, C.; Michard, C.; Andréa, C.; Charpentier, X.; Vianney, A.; Doublet, P. Deciphering Legionella Effector Delivery by Icm/Dot Secretion System Reveals a New Role for c-Di-GMP Signaling. J. Mol. Biol. 2021, 433 (13), 166985.
Equipe LegioPath

(4)          Bénet, T.; Amour, S.; Valette, M.; Saadatian-Elahi, M.; Aho-Glélé, L. S.; Berthelot, P.; Denis, M.-A.; Grando, J.; Landelle, C.; Astruc, K.; Paris, A.; Pillet, S.; Lina, B.; Vanhems, P.; AFP Study Group. Incidence of Asymptomatic and Symptomatic Influenza Among Healthcare Workers: A Multicenter Prospective Cohort Study. Clin. Infect. Dis. Off. Publ. Infect. Dis. Soc. Am. 2021, 72 (9), e311–e318.
Equipes PHE3ID et VirPath

(5)          Bornier, F.; Zas, E.; Potheret, D.; Laaberki, M.-H.; Coupat-Goutaland, B.; Charpentier, X. Environmental Free-Living Amoebae Can Predate on Diverse Antibiotic-Resistant Human Pathogens. Appl. Environ. Microbiol. 2021, 87 (18), e0074721.
Equipe Horigene

(6)          Boson, B.; Legros, V.; Zhou, B.; Siret, E.; Mathieu, C.; Cosset, F.-L.; Lavillette, D.; Denolly, S. The SARS-CoV-2 Envelope and Membrane Proteins Modulate Maturation and Retention of the Spike Protein, Allowing Assembly of Virus-like Particles. J. Biol. Chem. 2021, 296, 100111.

(7)          de Breyne, S.; Vindry, C.; Guillin, O.; Condé, L.; Mure, F.; Gruffat, H.; Chavatte, L.; Ohlmann, T. Translational Control of Coronaviruses. Nucleic Acids Res. 2020, 48 (22), 12502–12522.
Equipe REVE

(8)          El Guerche-Séblain, C.; Amour, S.; Bénet, T.; Hénaff, L.; Escuret, V.; Schellevis, F.; Vanhems, P. Incidence of Hospital-Acquired Influenza in Adults: A Prospective Surveillance Study from 2004 to 2017 in a French Tertiary Care Hospital. Am. J. Infect. Control 2021, 49 (8), 1066–1071.
Equipe PHE3ID

(9)          Enchéry, F.; Dumont, C.; Iampietro, M.; Pelissier, R.; Aurine, N.; Bloyet, L.-M.; Carbonnelle, C.; Mathieu, C.; Journo, C.; Gerlier, D.; Horvat, B. Nipah Virus W Protein Harnesses Nuclear 14-3-3 to Inhibit NF-ΚB-Induced Proinflammatory Response. Commun. Biol. 2021, 4 (1), 1292.
Equipe IbiV, NITROVIRE, OR..

(10)       Ferren, M.; Favède, V.; Decimo, D.; Iampietro, M.; Lieberman, N. A. P.; Weickert, J.-L.; Pelissier, R.; Mazelier, M.; Terrier, O.; Moscona, A.; Porotto, M.; Greninger, A. L.; Messaddeq, N.; Horvat, B.; Mathieu, C. Hamster Organotypic Modeling of SARS-CoV-2 Lung and Brainstem Infection. Nat. Commun. 2021, 12 (1), 5809. Equipe IbiVNITROVIRE.

(11)       Genestet, C.; Hodille, E.; Barbry, A.; Berland, J.-L.; Hoffmann, J.; Westeel, E.; Bastian, F.; Guichardant, M.; Venner, S.; Lina, G.; Ginevra, C.; Ader, F.; Goutelle, S.; Dumitrescu, O. Rifampicin Exposure Reveals Within-Host Mycobacterium Tuberculosis Diversity in Patients with Delayed Culture Conversion. PLoS Pathog. 2021, 17 (6), e1009643.
Equipe StaPath.

(12)       Gillet, Y.; Tristan, A.; Rasigade, J.-P.; Saadatian-Elahi, M.; Bouchiat, C.; Bes, M.; Dumitrescu, O.; Leloire, M.; Dupieux, C.; Laurent, F.; Lina, G.; Etienne, J.; Vanhems, P.; Argaud, L.; Vandenesch, F.; PVL pneumonia study group. Prognostic Factors of Severe Community-Acquired Staphylococcal Pneumonia in France. Eur. Respir. J. 2021, 58 (5), 2004445.
Equipe StaPathPHE3ID.

(13)       Goguyer-Deschaumes, R.; Waeckel, L.; Killian, M.; Rochereau, N.; Paul, S. Metabolites and Secretory Immunoglobulins: Messengers and Effectors of the Host-Microbiota Intestinal Equilibrium. Trends Immunol. 2022, 43 (1), 63–77.
Equipe GIMAP.

(14)       Hardy, L.; Juan, P.-A.; Coupat-Goutaland, B.; Charpentier, X. Transposon Insertion Sequencing in a Clinical Isolate of Legionella Pneumophila Identifies Essential Genes and Determinants of Natural Transformation. J. Bacteriol. 2021, 203 (3), e00548-20.
Equipe Horigene.

(15)       Jamilloux, Y.; Mathis, T.; Grunewald, O.; Dollfuss, H.; Henry, T.; Sève, P.; Meunier, I. ALPK1 Gene Mutations Drive Autoinflammation with Ectodermal Dysplasia and Progressive Vision Loss. J. Clin. Immunol. 2021, 41 (7), 1671–1673.
Equipe I2BA.

(16)       Legros, V.; Denolly, S.; Vogrig, M.; Boson, B.; Siret, E.; Rigaill, J.; Pillet, S.; Grattard, F.; Gonzalo, S.; Verhoeven, P.; Allatif, O.; Berthelot, P.; Pélissier, C.; Thiery, G.; Botelho-Nevers, E.; Millet, G.; Morel, J.; Paul, S.; Walzer, T.; Cosset, F.-L.; Bourlet, T.; Pozzetto, B. A Longitudinal Study of SARS-CoV-2-Infected Patients Reveals a High Correlation between Neutralizing Antibodies and COVID-19 Severity. Cell. Mol. Immunol. 2021, 18 (2), 318–327.
Equipe EVIR et GIMAP.

(17)       Lopez, J.; Mommert, M.; Mouton, W.; Pizzorno, A.; Brengel-Pesce, K.; Mezidi, M.; Villard, M.; Lina, B.; Richard, J.-C.; Fassier, J.-B.; Cheynet, V.; Padey, B.; Duliere, V.; Julien, T.; Paul, S.; Bastard, P.; Belot, A.; Bal, A.; Casanova, J.-L.; Rosa-Calatrava, M.; Morfin, F.; Walzer, T.; Trouillet-Assant, S. Correction: Early Nasal Type I IFN Immunity against SARS-CoV-2 Is Compromised in Patients with Autoantibodies against Type I IFNs. J. Exp. Med. 2021, 218 (10), jem.2021121108132021c.
Equipe Virpath, LYACTSGIMAP.

(18)       Lucifora, J.; Pastor, F.; Charles, É.; Pons, C.; Auclair, H.; Fusil, F.; Rivoire, M.; Cosset, F.-L.; Durantel, D.; Salvetti, A. Evidence for Long-Term Association of Virion-Delivered HBV Core Protein with CccDNA Independently of Viral Protein Production. JHEP Rep. Innov. Hepatol. 2021, 3 (5), 100330.
Equipe HepVir.

(19)       Manet, E.; Polvèche, H.; Mure, F.; Mrozek-Gorska, P.; Roisné-Hamelin, F.; Hammerschmidt, W.; Auboeuf, D.; Gruffat, H. Modulation of Alternative Splicing during Early Infection of Human Primary B Lymphocytes with Epstein-Barr Virus (EBV): A Novel Function for the Viral EBNA-LP Protein. Nucleic Acids Res. 2021, 49 (18), 10657–10676.
Equipe REVE.

(20)       Marziali, F.; Delpeuch, M.; Kumar, A.; Appourchaux, R.; Dufloo, J.; Tartour, K.; Etienne, L.; Cimarelli, A. Functional Heterogeneity of Mammalian IFITM Proteins against HIV-1. J. Virol. 2021, 95 (18), e0043921.
Equipe LP2L.

(21)       Mateo, M.; Reynard, S.; Journeaux, A.; Germain, C.; Hortion, J.; Carnec, X.; Picard, C.; Baillet, N.; Borges-Cardoso, V.; Merabet, O.; Vallve, A.; Barron, S.; Jourjon, O.; Lacroix, O.; Duthey, A.; Dirheimer, M.; Jouvion, G.; Moreau, P.-H.; Fellmann, L.; Carbonnelle, C.; Raoul, H.; Tangy, F.; Baize, S. A Single-Shot Lassa Vaccine Induces Long-Term Immunity and Protects Cynomolgus Monkeys against Heterologous Strains. Sci. Transl. Med. 2021, 13 (597), eabf6348.
Equipe UBIVE.

(22)       Mathieu, C.; Bovier, F. T.; Ferren, M.; Lieberman, N. A. P.; Predella, C.; Lalande, A.; Peddu, V.; Lin, M. J.; Addetia, A.; Patel, A.; Outlaw, V.; Corneo, B.; Dorrello, N. V.; Briese, T.; Hardie, D.; Horvat, B.; Moscona, A.; Greninger, A. L.; Porotto, M. Molecular Features of the Measles Virus Viral Fusion Complex That Favor Infection and Spread in the Brain. mBio 2021, 12 (3), e0079921.

(23)       Mathieu, C.; Touret, F.; Jacquemin, C.; Janin, Y. L.; Nougairède, A.; Brailly, M.; Mazelier, M.; Décimo, D.; Vasseur, V.; Hans, A.; Valle-Casuso, J.-C.; de Lamballerie, X.; Horvat, B.; André, P.; Si-Tahar, M.; Lotteau, V.; Vidalain, P.-O. A Bioluminescent 3CLPro Activity Assay to Monitor SARS-CoV-2 Replication and Identify Inhibitors. Viruses 2021, 13 (9), 1814.

(24)       Moreews, M.; Le Gouge, K.; Khaldi-Plassart, S.; Pescarmona, R.; Mathieu, A.-L.; Malcus, C.; Djebali, S.; Bellomo, A.; Dauwalder, O.; Perret, M.; Villard, M.; Chopin, E.; Rouvet, I.; Vandenesh, F.; Dupieux, C.; Pouyau, R.; Teyssedre, S.; Guerder, M.; Louazon, T.; Moulin-Zinsch, A.; Duperril, M.; Patural, H.; Giovannini-Chami, L.; Portefaix, A.; Kassai, B.; Venet, F.; Monneret, G.; Lombard, C.; Flodrops, H.; De Guillebon, J.-M.; Bajolle, F.; Launay, V.; Bastard, P.; Zhang, S.-Y.; Dubois, V.; Thaunat, O.; Richard, J.-C.; Mezidi, M.; Allatif, O.; Saker, K.; Dreux, M.; Abel, L.; Casanova, J.-L.; Marvel, J.; Trouillet-Assant, S.; Klatzmann, D.; Walzer, T.; Mariotti-Ferrandiz, E.; Javouhey, E.; Belot, A. Polyclonal Expansion of TCR Vbeta 21.3+ CD4+ and CD8+ T Cells Is a Hallmark of Multisystem Inflammatory Syndrome in Children. Sci. Immunol. 2021, 6 (59), eabh1516.
Equipe LYACTS, ICL, VIVVirpathNLRP3, StaPath.

(25)       Niu, T.; De Rosny, C.; Chautard, S.; Rey, A.; Patoli, D.; Groslambert, M.; Cosson, C.; Lagrange, B.; Zhang, Z.; Visvikis, O.; Hacot, S.; Hologne, M.; Walker, O.; Wong, J.; Wang, P.; Ricci, R.; Henry, T.; Boyer, L.; Petrilli, V.; Py, B. F. NLRP3 Phosphorylation in Its LRR Domain Critically Regulates Inflammasome Assembly. Nat. Commun. 2021, 12 (1), 5862.
Equipe NLRP3.

(26)       Pérez-Vargas, J.; Teppa, E.; Amirache, F.; Boson, B.; Pereira de Oliveira, R.; Combet, C.; Böckmann, A.; Fusil, F.; Freitas, N.; Carbone, A.; Cosset, F.-L. A Fusion Peptide in PreS1 and the Human Protein Disulfide Isomerase ERp57 Are Involved in Hepatitis B Virus Membrane Fusion Process. eLife 2021, 10, e64507.
Equipe EVIR.

(27)       Perrin-Cocon, L.; Vidalain, P.-O.; Jacquemin, C.; Aublin-Gex, A.; Olmstead, K.; Panthu, B.; Rautureau, G. J. P.; André, P.; Nyczka, P.; Hütt, M.-T.; Amoedo, N.; Rossignol, R.; Filipp, F. V.; Lotteau, V.; Diaz, O. A Hexokinase Isoenzyme Switch in Human Liver Cancer Cells Promotes Lipogenesis and Enhances Innate Immunity. Commun. Biol. 2021, 4 (1), 217.

(28)       Personnic, N.; Striednig, B.; Hilbi, H. Quorum Sensing Controls Persistence, Resuscitation, and Virulence of Legionella Subpopulations in Biofilms. ISME J. 2021, 15 (1), 196–210.

(29)       Pozzetto, B.; Legros, V.; Djebali, S.; Barateau, V.; Guibert, N.; Villard, M.; Peyrot, L.; Allatif, O.; Fassier, J.-B.; Massardier-Pilonchéry, A.; Brengel-Pesce, K.; Yaugel-Novoa, M.; Denolly, S.; Boson, B.; Bourlet, T.; Bal, A.; Valette, M.; Andrieu, T.; Lina, B.; Covid-Ser study group; Cosset, F.-L.; Paul, S.; Defrance, T.; Marvel, J.; Walzer, T.; Trouillet-Assant, S. Immunogenicity and Efficacy of Heterologous ChAdOx1-BNT162b2 Vaccination. Nature 2021, 600 (7890), 701–706.

(30)       Rocamonde, B.; Futsch, N.; Orii, N.; Allatif, O.; Penalva de Oliveira, A. C.; Mahieux, R.; Casseb, J.; Dutartre, H. Immunoprofiling of Fresh HAM/TSP Blood Samples Shows Altered Innate Cell Responsiveness. PLoS Negl. Trop. Dis. 2021, 15 (11), e0009940.
Equipe OR.

(31)       Rochereau, N.; Michaud, E.; Waeckel, L.; Killian, M.; Gayet, R.; Goguyer-Deschaumes, R.; Roblin, X.; Biolley, G.; Corthésy, B.; Paul, S. Essential Role of TOSO/FAIM3 in Intestinal IgM Reverse Transcytosis. Cell Rep. 2021, 37 (7), 110006.
Equipe GIMAP.

(32)       Rochereau, N.; Roblin, X.; Michaud, E.; Gayet, R.; Chanut, B.; Jospin, F.; Corthésy, B.; Paul, S. NOD2 Deficiency Increases Retrograde Transport of Secretory IgA Complexes in Crohn’s Disease. Nat. Commun. 2021, 12 (1), 261.
Equipe GIMAP.

(33)       Scheinman, P. L.; Vocanson, M.; Thyssen, J. P.; Johansen, J. D.; Nixon, R. L.; Dear, K.; Botto, N. C.; Morot, J.; Goldminz, A. M. Contact Dermatitis. Nat. Rev. Dis. Primer 2021, 7 (1), 38.
Equipe EIA.

(34)       Striednig, B.; Lanner, U.; Niggli, S.; Katic, A.; Vormittag, S.; Brülisauer, S.; Hochstrasser, R.; Kaech, A.; Welin, A.; Flieger, A.; Ziegler, U.; Schmidt, A.; Hilbi, H.; Personnic, N. Quorum Sensing Governs a Transmissive Legionella Subpopulation at the Pathogen Vacuole Periphery. EMBO Rep. 2021, 22 (9), e52972.

(35)       Villani, A. P.; Rozieres, A.; Bensaid, B.; Eriksson, K. K.; Mosnier, A.; Albert, F.; Mutez, V.; Brassard, O.; Baysal, T.; Tardieu, M.; Allatif, O.; Fusil, F.; Andrieu, T.; Jullien, D.; Dubois, V.; Giannoli, C.; Gruffat, H.; Pallardy, M.; Cosset, F.-L.; Nosbaum, A.; Kanagawa, O.; Maryanski, J. L.; Yerly, D.; Nicolas, J.-F.; Vocanson, M. Massive Clonal Expansion of Polycytotoxic Skin and Blood CD8+ T Cells in Patients with Toxic Epidermal Necrolysis. Sci. Adv. 2021, 7 (12), eabe0013.

(36)       Viret, C.; Duclaux-Loras, R.; Nancey, S.; Rozières, A.; Faure, M. Selective Autophagy Receptors in Antiviral Defense. Trends Microbiol. 2021, 29 (9), 798–810.
Equipe APY.

(37)       Zhang, J.; Le Gras, S.; Pouxvielh, K.; Faure, F.; Fallone, L.; Kern, N.; Moreews, M.; Mathieu, A.-L.; Schneider, R.; Marliac, Q.; Jung, M.; Berton, A.; Hayek, S.; Vidalain, P.-O.; Marçais, A.; Dodard, G.; Dejean, A.; Brossay, L.; Ghavi-Helm, Y.; Walzer, T. Sequential Actions of EOMES and T-BET Promote Stepwise Maturation of Natural Killer Cells. Nat. Commun. 2021, 12 (1), 5446.